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A few days ago I was doing complete migration of old Directadmin server to new Directadmin server which had different hostname. Everything went well but I was unable to register Letsencrypt SSL certificate for new server hostname.

I was getting error like this:

[root@myserver scripts]# ./letsencrypt.sh request my.server.com 4096
Domain does not exist on the system. Unable to find my.server.com in /etc/virtual/domainowners. Exiting...
no valid domain found - exiting

First thing I did is I add new hostname as domain to user admin. Certificate was indeed registered than, but not as server hostname (/usr/local/directadmin/conf/cacert.pem). I deleted domain than.

After a little search I found out that I forgot to change servername variable in directadmin.conf. So I changed it, restart directadmin but I was getting the same error. At the end I found out that the easiest way to fix this is to change hostname in Directadmin administration.

1. Go to Directadmin as admin user and navigate to Administrator Settings, then set some temporary hostname in Server’s Hostname. Let’s say my.server2.com.
2. Wait until cron will make changes – you should see new hostname in Administrator Settings when refreshing page.
3. Go in Administrator Settings again and change Server’s Hostname to your old hostname – my.server.com.
4. Run letsencrypt.sh again.

This time, certificate was registered successfully.

[root@myserver scripts]# ./letsencrypt.sh request my.server.com 4096
Setting up certificate for a hostname: my.server.com
Generating 4096 bit RSA key for let's encrypt account...
openssl genrsa 4096 > "/usr/local/directadmin/conf/letsencrypt.key"
Generating RSA private key, 4096 bit long modulus
...

[kofi]